Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm42632-201ENSMUST00000201707 2411 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm10698-201ENSMUST00000182663 604 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm27463-201ENSMUST00000183569 57 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Mir6404-201ENSMUST00000183699 94 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Trmt13-210ENSMUST00000198454 880 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Slc35b2-207ENSMUST00000226086 850 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39lQ9CQD0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Carlr-201ENSMUST00000181515 2574 ntBASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Gm10052-201ENSMUST00000168019 960 ntBASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Gm4217-201ENSMUST00000182243 1002 ntBASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Gm7729-201ENSMUST00000050143 801 ntBASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39lQ9CQD0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms