Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.61□□□□□ -0.07
Trim16Q99PP9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.61□□□□□ -0.07
Trim16Q99PP9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.6□□□□□ -0.07
Trim16Q99PP9 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.6□□□□□ -0.07
Trim16Q99PP9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim16Q99PP9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.59□□□□□ -0.07
Trim16Q99PP9 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.59□□□□□ -0.07
Trim16Q99PP9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim16Q99PP9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim16Q99PP9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim16Q99PP9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim16Q99PP9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.58□□□□□ -0.07
Trim16Q99PP9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Gm14722-201ENSMUST00000118943 689 ntBASIC14.58□□□□□ -0.08
Trim16Q99PP9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.58□□□□□ -0.08
Trim16Q99PP9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.58□□□□□ -0.08
Trim16Q99PP9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms