Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.42□□□□□ -0.26
Raf1Q99N57 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Raf1Q99N57 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Efs-202ENSMUST00000227037 2540 ntBASIC13.42□□□□□ -0.26
Raf1Q99N57 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Raf1Q99N57 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.41□□□□□ -0.26
Raf1Q99N57 Gm11594-201ENSMUST00000122313 162 ntBASIC13.41□□□□□ -0.26
Raf1Q99N57 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.41□□□□□ -0.26
Raf1Q99N57 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Raf1Q99N57 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Raf1Q99N57 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gm15165-201ENSMUST00000118140 502 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.4□□□□□ -0.26
Raf1Q99N57 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.4□□□□□ -0.26
Raf1Q99N57 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gm6296-201ENSMUST00000222599 943 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.4□□□□□ -0.26
Raf1Q99N57 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Raf1Q99N57 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.4□□□□□ -0.26
Raf1Q99N57 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Raf1Q99N57 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Raf1Q99N57 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Raf1Q99N57 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Raf1Q99N57 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Raf1Q99N57 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Raf1Q99N57 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.39□□□□□ -0.27
Raf1Q99N57 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.39□□□□□ -0.27
Raf1Q99N57 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Raf1Q99N57 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.39□□□□□ -0.27
Raf1Q99N57 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms