Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Efs-202ENSMUST00000227037 2540 ntBASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Gm17971-201ENSMUST00000190239 806 ntBASIC14.43□□□□□ -0.1
Cstf3Q99LI7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf3Q99LI7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Gm6550-201ENSMUST00000187574 993 ntBASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.42□□□□□ -0.1
Cstf3Q99LI7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf3Q99LI7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Gm7153-201ENSMUST00000117092 455 ntBASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Gm15173-201ENSMUST00000122049 433 ntBASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf3Q99LI7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.4□□□□□ -0.1
Cstf3Q99LI7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms