Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Gm27618-201ENSMUST00000183671 60 ntBASIC17.55■□□□□ 0.4
Col20a1Q923P0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.55■□□□□ 0.4
Col20a1Q923P0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm8410-201ENSMUST00000117225 605 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm25144-201ENSMUST00000179561 110 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm25352-201ENSMUST00000179815 110 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm18766-201ENSMUST00000189811 808 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm2451-201ENSMUST00000199447 999 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm10290-201ENSMUST00000200451 999 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm45098-201ENSMUST00000207179 657 ntBASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col20a1Q923P0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.53■□□□□ 0.4
Col20a1Q923P0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Gm8749-201ENSMUST00000117737 331 ntBASIC17.53■□□□□ 0.4
Col20a1Q923P0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.53■□□□□ 0.4
Col20a1Q923P0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col20a1Q923P0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Gm13223-201ENSMUST00000118609 747 ntBASIC17.52■□□□□ 0.4
Col20a1Q923P0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Gm28630-201ENSMUST00000187806 498 ntBASIC17.52■□□□□ 0.4
Col20a1Q923P0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col20a1Q923P0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms