Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb22Q91XZ8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Gm11594-201ENSMUST00000122313 162 ntBASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb22Q91XZ8 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Gm11025-201ENSMUST00000140773 466 ntBASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb22Q91XZ8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb22Q91XZ8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms