Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb6Q91XZ4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm8749-201ENSMUST00000117737 331 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm16026-204ENSMUST00000162652 683 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm17968-201ENSMUST00000194902 784 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Thap2-203ENSMUST00000218989 527 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb6Q91XZ4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Gm9727-201ENSMUST00000161387 555 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms