Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx41Q91VN6 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Gm15427-201ENSMUST00000117288 531 ntBASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx41Q91VN6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Gm27494-201ENSMUST00000184735 189 ntBASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx41Q91VN6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx41Q91VN6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Mir1895-201ENSMUST00000122615 79 ntBASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Gm45612-201ENSMUST00000211320 160 ntBASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Thap2-203ENSMUST00000218989 527 ntBASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms