Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tram1Q91V04 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tram1Q91V04 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.85□□□□□ -0.35
Tram1Q91V04 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tram1Q91V04 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tram1Q91V04 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tram1Q91V04 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Tram1Q91V04 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.84□□□□□ -0.35
Tram1Q91V04 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.84□□□□□ -0.35
Tram1Q91V04 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Gm15039-201ENSMUST00000118914 875 ntBASIC12.84□□□□□ -0.35
Tram1Q91V04 Gm13559-201ENSMUST00000120476 863 ntBASIC12.84□□□□□ -0.35
Tram1Q91V04 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tram1Q91V04 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.84□□□□□ -0.35
Tram1Q91V04 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.84□□□□□ -0.35
Tram1Q91V04 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tram1Q91V04 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tram1Q91V04 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tram1Q91V04 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tram1Q91V04 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tram1Q91V04 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tram1Q91V04 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Tram1Q91V04 Gm8344-201ENSMUST00000119813 856 ntBASIC12.83□□□□□ -0.36
Tram1Q91V04 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.83□□□□□ -0.36
Tram1Q91V04 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.83□□□□□ -0.36
Tram1Q91V04 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tram1Q91V04 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.83□□□□□ -0.36
Tram1Q91V04 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.83□□□□□ -0.36
Tram1Q91V04 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Gm10812-201ENSMUST00000099864 546 ntBASIC12.83□□□□□ -0.36
Tram1Q91V04 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.83□□□□□ -0.36
Tram1Q91V04 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Tram1Q91V04 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tram1Q91V04 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.83□□□□□ -0.36
Tram1Q91V04 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tram1Q91V04 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms