Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb11Q91UZ8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Mir3113-201ENSMUST00000175478 76 ntBASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb11Q91UZ8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm8000-201ENSMUST00000188378 592 ntBASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm44492-201ENSMUST00000197012 141 ntBASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Gm10175-201ENSMUST00000086013 645 ntBASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb11Q91UZ8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb11Q91UZ8 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms