Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TraipQ8VIG6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TraipQ8VIG6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TraipQ8VIG6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.83■□□□□ 0.13
TraipQ8VIG6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TraipQ8VIG6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.83■□□□□ 0.12
TraipQ8VIG6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TraipQ8VIG6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Gm13453-201ENSMUST00000118708 357 ntBASIC15.82■□□□□ 0.12
TraipQ8VIG6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.82■□□□□ 0.12
TraipQ8VIG6 Gm45098-201ENSMUST00000207179 657 ntBASIC15.82■□□□□ 0.12
TraipQ8VIG6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Prob1-201ENSMUST00000097619 3021 ntBASIC15.82■□□□□ 0.12
TraipQ8VIG6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TraipQ8VIG6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm5566-201ENSMUST00000116118 459 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm13223-201ENSMUST00000118609 747 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm2451-201ENSMUST00000199447 999 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm10290-201ENSMUST00000200451 999 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.81■□□□□ 0.12
TraipQ8VIG6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TraipQ8VIG6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TraipQ8VIG6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms