Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Gm12008-201ENSMUST00000117791 755 ntBASIC15.06■□□□□ 0
Rpa1Q8VEE4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rpa1Q8VEE4 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.05■□□□□ 0
Rpa1Q8VEE4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpa1Q8VEE4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rpa1Q8VEE4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpa1Q8VEE4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpa1Q8VEE4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpa1Q8VEE4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpa1Q8VEE4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Celf4-206ENSMUST00000224553 1729 ntBASIC15.03■□□□□ -0
Rpa1Q8VEE4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms