Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmcd1Q8VEE1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Gm5479-201ENSMUST00000160578 435 ntBASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Gm28911-201ENSMUST00000188837 117 ntBASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Gm9257-201ENSMUST00000221254 232 ntBASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmcd1Q8VEE1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm27631-201ENSMUST00000184163 466 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm29310-201ENSMUST00000185468 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21825-201ENSMUST00000185728 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm29109-201ENSMUST00000185895 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21896-201ENSMUST00000186520 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21873-201ENSMUST00000186728 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21794-201ENSMUST00000187056 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21880-201ENSMUST00000187275 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21826-201ENSMUST00000187451 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21198-201ENSMUST00000188393 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21749-201ENSMUST00000189343 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21901-201ENSMUST00000189568 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm29424-201ENSMUST00000189716 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm28599-201ENSMUST00000189838 694 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21867-201ENSMUST00000189917 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm29269-201ENSMUST00000190087 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21722-201ENSMUST00000190153 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm28423-201ENSMUST00000190701 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21899-201ENSMUST00000190745 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21910-201ENSMUST00000191163 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21849-201ENSMUST00000191571 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm28678-201ENSMUST00000191593 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm20910-201ENSMUST00000193268 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm21871-201ENSMUST00000194621 696 ntBASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmcd1Q8VEE1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lmcd1Q8VEE1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms