Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgms1Q8VCQ6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Gm5264-201ENSMUST00000190584 848 ntBASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgms1Q8VCQ6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sgms1Q8VCQ6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Gm8749-201ENSMUST00000117737 331 ntBASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Gm11594-201ENSMUST00000122313 162 ntBASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgms1Q8VCQ6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Gm14140-201ENSMUST00000119999 995 ntBASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Gm15467-201ENSMUST00000120582 445 ntBASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.07■□□□□ 0.16
Sgms1Q8VCQ6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms