Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm1Q8VC85 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Gm7222-201ENSMUST00000117512 906 ntBASIC14.32□□□□□ -0.12
Lsm1Q8VC85 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm1Q8VC85 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm1Q8VC85 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm12008-201ENSMUST00000117791 755 ntBASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm11764-201ENSMUST00000120221 623 ntBASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm21362-201ENSMUST00000194272 928 ntBASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm1Q8VC85 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.3□□□□□ -0.12
Lsm1Q8VC85 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Gm9103-201ENSMUST00000119371 405 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms