Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slf1Q8R3P9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Gm7367-201ENSMUST00000057611 492 ntBASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slf1Q8R3P9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slf1Q8R3P9 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.08■□□□□ 0.01
Slf1Q8R3P9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slf1Q8R3P9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.08■□□□□ 0.01
Slf1Q8R3P9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slf1Q8R3P9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.08■□□□□ 0.01
Slf1Q8R3P9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.08■□□□□ 0
Slf1Q8R3P9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.08■□□□□ 0
Slf1Q8R3P9 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.08■□□□□ 0
Slf1Q8R3P9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.08■□□□□ 0
Slf1Q8R3P9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slf1Q8R3P9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slf1Q8R3P9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slf1Q8R3P9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slf1Q8R3P9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.07■□□□□ 0
Slf1Q8R3P9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slf1Q8R3P9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms