Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim29Q8R2Q0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim29Q8R2Q0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim29Q8R2Q0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim29Q8R2Q0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim29Q8R2Q0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim29Q8R2Q0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim29Q8R2Q0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim29Q8R2Q0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim29Q8R2Q0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim29Q8R2Q0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim29Q8R2Q0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim29Q8R2Q0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim29Q8R2Q0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms