Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Gm11424-201ENSMUST00000121929 829 ntBASIC19■□□□□ 0.63
Chmp7Q8R1T1 H2-Pa-201ENSMUST00000182803 626 ntBASIC19■□□□□ 0.63
Chmp7Q8R1T1 Gm45098-201ENSMUST00000207179 657 ntBASIC19■□□□□ 0.63
Chmp7Q8R1T1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 AC132863.2-201ENSMUST00000226643 799 ntBASIC19■□□□□ 0.63
Chmp7Q8R1T1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp7Q8R1T1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Gm13464-201ENSMUST00000119418 935 ntBASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Gm16215-201ENSMUST00000161990 637 ntBASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Gm27838-201ENSMUST00000184829 128 ntBASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chmp7Q8R1T1 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Syt7-204ENSMUST00000223586 1344 ntBASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp7Q8R1T1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Gm44855-201ENSMUST00000205725 362 ntBASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Shd-206ENSMUST00000225145 998 ntBASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp7Q8R1T1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms