Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpp40Q8R1F9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpp40Q8R1F9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rpp40Q8R1F9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Rpp40Q8R1F9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpp40Q8R1F9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpp40Q8R1F9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpp40Q8R1F9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.96■□□□□ 0.14
Rpp40Q8R1F9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rpp40Q8R1F9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.96■□□□□ 0.14
Rpp40Q8R1F9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rpp40Q8R1F9 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Mir6990-201ENSMUST00000183724 91 ntBASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpp40Q8R1F9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpp40Q8R1F9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpp40Q8R1F9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms