Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Gm10154-201ENSMUST00000084445 354 ntBASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sf3a1Q8K4Z5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Gm9385-201ENSMUST00000117563 472 ntBASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sf3a1Q8K4Z5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Gm11594-201ENSMUST00000122313 162 ntBASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Gm25911-201ENSMUST00000157621 56 ntBASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Sf3a1Q8K4Z5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sf3a1Q8K4Z5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms