Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf4Q8K4J2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Gm18101-201ENSMUST00000215769 548 ntBASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf4Q8K4J2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm8825-201ENSMUST00000182565 998 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm4518-201ENSMUST00000182638 718 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm5417-201ENSMUST00000079706 384 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf4Q8K4J2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf4Q8K4J2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf4Q8K4J2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms