Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm15375-201ENSMUST00000119510 849 ntBASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm44549-201ENSMUST00000208351 577 ntBASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist3h2bbQ8CGP0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms