Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Gm25668-201ENSMUST00000157700 129 ntBASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Gm43947-201ENSMUST00000203019 959 ntBASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Gm29705-201ENSMUST00000212598 474 ntBASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Snora73a-201ENSMUST00000082453 205 ntBASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpn1Q8CCS6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Gm8839-201ENSMUST00000121279 1645 ntBASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Gm14381-201ENSMUST00000122105 414 ntBASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Gm4819-201ENSMUST00000182170 1009 ntBASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Gm27682-201ENSMUST00000183930 110 ntBASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpn1Q8CCS6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Gm16342-201ENSMUST00000124025 1025 ntBASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Gm18905-201ENSMUST00000205454 928 ntBASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpn1Q8CCS6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gm4993-201ENSMUST00000118719 1174 ntBASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Mir5120-201ENSMUST00000175020 78 ntBASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gm5523-201ENSMUST00000180415 997 ntBASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 CT030182.1-201ENSMUST00000225935 533 ntBASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gm38037-201ENSMUST00000192600 1624 ntBASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Pabpn1Q8CCS6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm15376-201ENSMUST00000122258 783 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm8810-201ENSMUST00000172895 754 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm29396-201ENSMUST00000185659 716 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm8099-201ENSMUST00000200510 742 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 AC123645.1-201ENSMUST00000228469 605 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Ankra2-208ENSMUST00000226100 1476 ntBASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpn1Q8CCS6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pabpn1Q8CCS6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC22.64■■□□□ 1.22
Pabpn1Q8CCS6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Gm34767-201ENSMUST00000191813 1062 ntBASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Celf4-206ENSMUST00000224553 1729 ntBASIC22.64■■□□□ 1.21
Pabpn1Q8CCS6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms