Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Gm43125-201ENSMUST00000201724 730 ntBASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx1Q8C8B0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Gm45098-201ENSMUST00000207179 657 ntBASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx1Q8C8B0 Carlr-201ENSMUST00000181515 2574 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm22065-201ENSMUST00000103753 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm22066-201ENSMUST00000103761 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24932-201ENSMUST00000103763 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24115-201ENSMUST00000103799 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm22190-201ENSMUST00000103827 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm22191-201ENSMUST00000103831 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24721-201ENSMUST00000103849 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm28018-201ENSMUST00000103869 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm26399-201ENSMUST00000103937 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm25349-201ENSMUST00000177728 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm23616-201ENSMUST00000177797 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm25871-201ENSMUST00000177816 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx1Q8C8B0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms