Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.71■□□□□ 0.11
Uba3Q8C878 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Uba3Q8C878 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.71■□□□□ 0.11
Uba3Q8C878 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.71■□□□□ 0.11
Uba3Q8C878 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.71■□□□□ 0.11
Uba3Q8C878 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.71■□□□□ 0.11
Uba3Q8C878 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.71■□□□□ 0.11
Uba3Q8C878 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.71■□□□□ 0.11
Uba3Q8C878 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Uba3Q8C878 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.71■□□□□ 0.11
Uba3Q8C878 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Uba3Q8C878 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Uba3Q8C878 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Uba3Q8C878 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Uba3Q8C878 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Uba3Q8C878 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Uba3Q8C878 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Uba3Q8C878 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Uba3Q8C878 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Uba3Q8C878 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.7■□□□□ 0.1
Uba3Q8C878 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.7■□□□□ 0.1
Uba3Q8C878 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Gm17271-201ENSMUST00000165535 355 ntBASIC15.7■□□□□ 0.1
Uba3Q8C878 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.7■□□□□ 0.1
Uba3Q8C878 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.7■□□□□ 0.1
Uba3Q8C878 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Uba3Q8C878 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.69■□□□□ 0.1
Uba3Q8C878 Gm25911-201ENSMUST00000157621 56 ntBASIC15.69■□□□□ 0.1
Uba3Q8C878 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.69■□□□□ 0.1
Uba3Q8C878 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.69■□□□□ 0.1
Uba3Q8C878 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.69■□□□□ 0.1
Uba3Q8C878 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Uba3Q8C878 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Uba3Q8C878 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Uba3Q8C878 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms