Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Gm8062-201ENSMUST00000139696 444 ntBASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Mir3547-201ENSMUST00000175461 88 ntBASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Gm9229-201ENSMUST00000222777 126 ntBASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap54Q8C6S9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Mir3102-201ENSMUST00000175555 104 ntBASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap54Q8C6S9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm38241-201ENSMUST00000192641 898 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm27701-201ENSMUST00000184498 110 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap54Q8C6S9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap54Q8C6S9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms