Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.04□□□□□ -0.16
Ska3Q8C263 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.04□□□□□ -0.16
Ska3Q8C263 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska3Q8C263 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ska3Q8C263 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ska3Q8C263 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ska3Q8C263 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ska3Q8C263 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Gm15467-201ENSMUST00000120582 445 ntBASIC14.03□□□□□ -0.16
Ska3Q8C263 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ska3Q8C263 Gm27525-201ENSMUST00000184465 107 ntBASIC14.03□□□□□ -0.16
Ska3Q8C263 Gm2272-201ENSMUST00000194903 582 ntBASIC14.03□□□□□ -0.16
Ska3Q8C263 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.03□□□□□ -0.16
Ska3Q8C263 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska3Q8C263 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.02□□□□□ -0.16
Ska3Q8C263 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
Ska3Q8C263 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ska3Q8C263 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska3Q8C263 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.02□□□□□ -0.17
Ska3Q8C263 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Gm11779-201ENSMUST00000118541 368 ntBASIC14.02□□□□□ -0.17
Ska3Q8C263 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.02□□□□□ -0.17
Ska3Q8C263 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.02□□□□□ -0.17
Ska3Q8C263 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.02□□□□□ -0.17
Ska3Q8C263 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.02□□□□□ -0.17
Ska3Q8C263 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ska3Q8C263 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska3Q8C263 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ska3Q8C263 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ska3Q8C263 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ska3Q8C263 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.01□□□□□ -0.17
Ska3Q8C263 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.01□□□□□ -0.17
Ska3Q8C263 Gm8000-201ENSMUST00000188378 592 ntBASIC14.01□□□□□ -0.17
Ska3Q8C263 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.01□□□□□ -0.17
Ska3Q8C263 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.01□□□□□ -0.17
Ska3Q8C263 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.01□□□□□ -0.17
Ska3Q8C263 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ska3Q8C263 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.01□□□□□ -0.17
Ska3Q8C263 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms