Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3rf2Q8BZT2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Sh3rf2Q8BZT2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Gm13015-201ENSMUST00000118674 204 ntBASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Gm18049-201ENSMUST00000208909 581 ntBASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3rf2Q8BZT2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Gm27618-201ENSMUST00000183671 60 ntBASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms