Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.64□□□□□ -0.55
Chd9Q8BYH8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd9Q8BYH8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd9Q8BYH8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd9Q8BYH8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Gm8099-201ENSMUST00000200510 742 ntBASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chd9Q8BYH8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Gm26083-201ENSMUST00000157904 193 ntBASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Gm43822-201ENSMUST00000200285 476 ntBASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd9Q8BYH8 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm6407-201ENSMUST00000176468 549 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm19220-201ENSMUST00000222682 803 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm28911-201ENSMUST00000188837 117 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Gm5363-201ENSMUST00000211927 938 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.61□□□□□ -0.55
Chd9Q8BYH8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd9Q8BYH8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms