Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp47Q8BY87 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 AA543401-201ENSMUST00000164248 1269 ntBASIC20.97■□□□□ 0.95
Usp47Q8BY87 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.97■□□□□ 0.95
Usp47Q8BY87 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Camk2g-217ENSMUST00000226630 1937 ntBASIC20.97■□□□□ 0.95
Usp47Q8BY87 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Gm13823-201ENSMUST00000119930 345 ntBASIC20.97■□□□□ 0.95
Usp47Q8BY87 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Gm38294-201ENSMUST00000192831 381 ntBASIC20.97■□□□□ 0.95
Usp47Q8BY87 Gm44872-201ENSMUST00000207864 420 ntBASIC20.97■□□□□ 0.95
Usp47Q8BY87 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp47Q8BY87 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Gm28630-201ENSMUST00000187806 498 ntBASIC20.96■□□□□ 0.95
Usp47Q8BY87 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.96■□□□□ 0.95
Usp47Q8BY87 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp47Q8BY87 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp47Q8BY87 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 AC154412.1-201ENSMUST00000226540 2786 ntBASIC20.94■□□□□ 0.94
Usp47Q8BY87 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp47Q8BY87 Gm13223-201ENSMUST00000118609 747 ntBASIC20.94■□□□□ 0.94
Usp47Q8BY87 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms