Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Gm7153-201ENSMUST00000117092 455 ntBASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsfm13Q8BXS2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsfm13Q8BXS2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsfm13Q8BXS2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfsfm13Q8BXS2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Tnfsfm13Q8BXS2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
Tnfsfm13Q8BXS2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfsfm13Q8BXS2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfsfm13Q8BXS2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsfm13Q8BXS2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfsfm13Q8BXS2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfsfm13Q8BXS2 Gm11452-201ENSMUST00000122376 690 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms