Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip4Q8BQP8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rab11fip4Q8BQP8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rab11fip4Q8BQP8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip4Q8BQP8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip4Q8BQP8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip4Q8BQP8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip4Q8BQP8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip4Q8BQP8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms