Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Rassf8-202ENSMUST00000058538 1131 ntBASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.28■□□□□ 0.68
Col16a1Q8BLX7 Gm12585-201ENSMUST00000117307 290 ntBASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.27■□□□□ 0.68
Col16a1Q8BLX7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Gm33320-201ENSMUST00000192232 530 ntBASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Col16a1Q8BLX7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.26■□□□□ 0.67
Col16a1Q8BLX7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Gm45331-201ENSMUST00000209868 554 ntBASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col16a1Q8BLX7 Gm5912-201ENSMUST00000122282 1438 ntBASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Gm12390-201ENSMUST00000117897 397 ntBASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms