Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh20Q8BIZ0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh20Q8BIZ0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh20Q8BIZ0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Gm18206-201ENSMUST00000207027 926 ntBASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh20Q8BIZ0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Gm12134-201ENSMUST00000122109 520 ntBASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Gm27646-201ENSMUST00000183989 110 ntBASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms