Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 App-207ENSMUST00000227737 2827 ntBASIC14.28□□□□□ -0.12
SynbQ8BI41 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynbQ8BI41 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SynbQ8BI41 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SynbQ8BI41 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynbQ8BI41 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.27□□□□□ -0.12
SynbQ8BI41 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynbQ8BI41 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SynbQ8BI41 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SynbQ8BI41 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynbQ8BI41 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SynbQ8BI41 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynbQ8BI41 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
SynbQ8BI41 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.27□□□□□ -0.13
SynbQ8BI41 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 AA543401-201ENSMUST00000164248 1269 ntBASIC14.27□□□□□ -0.13
SynbQ8BI41 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SynbQ8BI41 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SynbQ8BI41 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SynbQ8BI41 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.27□□□□□ -0.13
SynbQ8BI41 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.26□□□□□ -0.13
SynbQ8BI41 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.26□□□□□ -0.13
SynbQ8BI41 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.26□□□□□ -0.13
SynbQ8BI41 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SynbQ8BI41 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynbQ8BI41 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Gm13365-201ENSMUST00000121188 973 ntBASIC14.25□□□□□ -0.13
SynbQ8BI41 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Gm44335-201ENSMUST00000196879 141 ntBASIC14.25□□□□□ -0.13
SynbQ8BI41 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.25□□□□□ -0.13
SynbQ8BI41 Gm44297-201ENSMUST00000198304 141 ntBASIC14.25□□□□□ -0.13
SynbQ8BI41 Gm44346-201ENSMUST00000198851 141 ntBASIC14.25□□□□□ -0.13
SynbQ8BI41 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.25□□□□□ -0.13
SynbQ8BI41 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynbQ8BI41 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms