Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Gm13559-201ENSMUST00000120476 863 ntBASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc5a7Q8BGY9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Mir770-201ENSMUST00000103252 94 ntBASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc5a7Q8BGY9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms