Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm12260-201ENSMUST00000122447 411 ntBASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm5177-201ENSMUST00000183092 997 ntBASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm17968-201ENSMUST00000194902 784 ntBASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Atg4bQ8BGE6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Gm27525-201ENSMUST00000184465 107 ntBASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Gm2272-201ENSMUST00000194903 582 ntBASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Gm6443-201ENSMUST00000203599 874 ntBASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4bQ8BGE6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4bQ8BGE6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms