Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Gm6443-201ENSMUST00000203599 874 ntBASIC14.54□□□□□ -0.08
Trim50Q810I2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.54□□□□□ -0.08
Trim50Q810I2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim50Q810I2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.54□□□□□ -0.08
Trim50Q810I2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim50Q810I2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim50Q810I2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim50Q810I2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.53□□□□□ -0.08
Trim50Q810I2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim50Q810I2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim50Q810I2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim50Q810I2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.52□□□□□ -0.08
Trim50Q810I2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim50Q810I2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim50Q810I2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 AW822252-206ENSMUST00000208904 237 ntBASIC14.52□□□□□ -0.09
Trim50Q810I2 Gm5364-201ENSMUST00000216789 889 ntBASIC14.52□□□□□ -0.09
Trim50Q810I2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.52□□□□□ -0.09
Trim50Q810I2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim50Q810I2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim50Q810I2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Trim50Q810I2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms