Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp6nlQ80XC3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Gm5479-201ENSMUST00000160578 435 ntBASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Gm9719-201ENSMUST00000162765 543 ntBASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp6nlQ80XC3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Gm44855-201ENSMUST00000205725 362 ntBASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Syt7-205ENSMUST00000224135 1557 ntBASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp6nlQ80XC3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Gm24543-201ENSMUST00000103867 82 ntBASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Shd-206ENSMUST00000225145 998 ntBASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp6nlQ80XC3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Gm15321-201ENSMUST00000121290 288 ntBASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Usp6nlQ80XC3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms