Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Gm13616-201ENSMUST00000120600 222 ntBASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh19Q80TF3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Gm10253-201ENSMUST00000194270 940 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Gm7774-201ENSMUST00000200064 533 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh19Q80TF3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Gm25287-201ENSMUST00000103846 110 ntBASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Gm22918-201ENSMUST00000103855 110 ntBASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Mir6956-201ENSMUST00000183598 62 ntBASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Gm37444-201ENSMUST00000193605 439 ntBASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh19Q80TF3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms