Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Gm43767-201ENSMUST00000198933 381 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3d21Q7TSG5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Gm14140-201ENSMUST00000119999 995 ntBASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3d21Q7TSG5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3d21Q7TSG5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.3■□□□□ 0.2
Sh3d21Q7TSG5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms