Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NfrkbQ6PIJ4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.83■□□□□ 0.29
NfrkbQ6PIJ4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NfrkbQ6PIJ4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NfrkbQ6PIJ4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Mir6977-201ENSMUST00000184960 64 ntBASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NfrkbQ6PIJ4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Gm12428-201ENSMUST00000119844 727 ntBASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Gm9824-201ENSMUST00000178707 561 ntBASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Gm38225-201ENSMUST00000194001 393 ntBASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.81■□□□□ 0.28
NfrkbQ6PIJ4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms