Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.18□□□□□ -0.14
Trim45Q6PFY8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Gm5867-201ENSMUST00000063197 592 ntBASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim45Q6PFY8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Gm14494-201ENSMUST00000118786 435 ntBASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Gm12260-201ENSMUST00000122447 411 ntBASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Gm45167-201ENSMUST00000208007 322 ntBASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim45Q6PFY8 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.16□□□□□ -0.14
Trim45Q6PFY8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim45Q6PFY8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim45Q6PFY8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms