Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup98Q6PFD9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Nup98Q6PFD9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Gm20445-201ENSMUST00000061905 565 ntBASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup98Q6PFD9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup98Q6PFD9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup98Q6PFD9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms