Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Gm7775-201ENSMUST00000218871 853 ntBASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PdgfrlQ6PE55 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Gm27838-201ENSMUST00000184829 128 ntBASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Gm7730-201ENSMUST00000212486 454 ntBASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Gm2423-201ENSMUST00000074863 733 ntBASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PdgfrlQ6PE55 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Gm14719-201ENSMUST00000121891 340 ntBASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Gm15487-201ENSMUST00000122373 465 ntBASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfrlQ6PE55 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Gm5745-201ENSMUST00000183748 313 ntBASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfrlQ6PE55 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms