Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Rnf220Q6PDX6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf220Q6PDX6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Gm18101-201ENSMUST00000215769 548 ntBASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf220Q6PDX6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms