Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.67■□□□□ 0.1
Scube3Q66PY1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.66■□□□□ 0.1
Scube3Q66PY1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Gm43575-201ENSMUST00000196420 516 ntBASIC15.66■□□□□ 0.1
Scube3Q66PY1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube3Q66PY1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.65■□□□□ 0.1
Scube3Q66PY1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.65■□□□□ 0.1
Scube3Q66PY1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube3Q66PY1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Scube3Q66PY1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Gm11025-201ENSMUST00000140773 466 ntBASIC15.64■□□□□ 0.09
Scube3Q66PY1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.64■□□□□ 0.09
Scube3Q66PY1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Scube3Q66PY1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms