Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.35□□□□□ -0.11
Sdc3Q64519 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.35□□□□□ -0.11
Sdc3Q64519 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sdc3Q64519 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.34□□□□□ -0.11
Sdc3Q64519 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.34□□□□□ -0.11
Sdc3Q64519 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sdc3Q64519 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.34□□□□□ -0.11
Sdc3Q64519 Thap2-203ENSMUST00000218989 527 ntBASIC14.34□□□□□ -0.11
Sdc3Q64519 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.34□□□□□ -0.11
Sdc3Q64519 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc3Q64519 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc3Q64519 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc3Q64519 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc3Q64519 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sdc3Q64519 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc3Q64519 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.33□□□□□ -0.11
Sdc3Q64519 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sdc3Q64519 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Sdc3Q64519 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sdc3Q64519 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sdc3Q64519 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.32□□□□□ -0.12
Sdc3Q64519 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.32□□□□□ -0.12
Sdc3Q64519 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc3Q64519 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms