Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sycp1Q62209 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sycp1Q62209 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sycp1Q62209 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sycp1Q62209 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sycp1Q62209 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.75■□□□□ 0.27
Sycp1Q62209 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sycp1Q62209 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.75■□□□□ 0.27
Sycp1Q62209 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.74■□□□□ 0.27
Sycp1Q62209 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.74■□□□□ 0.27
Sycp1Q62209 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.74■□□□□ 0.27
Sycp1Q62209 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.74■□□□□ 0.27
Sycp1Q62209 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sycp1Q62209 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.74■□□□□ 0.27
Sycp1Q62209 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.74■□□□□ 0.27
Sycp1Q62209 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sycp1Q62209 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Gm1401-201ENSMUST00000122048 772 ntBASIC16.73■□□□□ 0.27
Sycp1Q62209 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.73■□□□□ 0.27
Sycp1Q62209 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Sycp1Q62209 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sycp1Q62209 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.72■□□□□ 0.27
Sycp1Q62209 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.72■□□□□ 0.27
Sycp1Q62209 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sycp1Q62209 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sycp1Q62209 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sycp1Q62209 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sycp1Q62209 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.72■□□□□ 0.27
Sycp1Q62209 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.72■□□□□ 0.27
Sycp1Q62209 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.72■□□□□ 0.27
Sycp1Q62209 Gm18206-201ENSMUST00000207027 926 ntBASIC16.72■□□□□ 0.27
Sycp1Q62209 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.72■□□□□ 0.27
Sycp1Q62209 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.72■□□□□ 0.27
Sycp1Q62209 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.72■□□□□ 0.27
Sycp1Q62209 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sycp1Q62209 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.71■□□□□ 0.27
Sycp1Q62209 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sycp1Q62209 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sycp1Q62209 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.71■□□□□ 0.27
Sycp1Q62209 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Sycp1Q62209 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.71■□□□□ 0.27
Sycp1Q62209 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.71■□□□□ 0.27
Sycp1Q62209 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.71■□□□□ 0.27
Sycp1Q62209 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.71■□□□□ 0.27
Sycp1Q62209 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.71■□□□□ 0.27
Sycp1Q62209 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms