Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rai1Q61818 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 AA619741-201ENSMUST00000195095 646 ntBASIC14.23□□□□□ -0.13
Rai1Q61818 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.23□□□□□ -0.13
Rai1Q61818 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Rai1Q61818 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rai1Q61818 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Rai1Q61818 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rai1Q61818 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Gm11478-201ENSMUST00000117851 599 ntBASIC14.22□□□□□ -0.13
Rai1Q61818 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rai1Q61818 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Rai1Q61818 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Gm15823-201ENSMUST00000064305 670 ntBASIC14.22□□□□□ -0.13
Rai1Q61818 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rai1Q61818 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rai1Q61818 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.21□□□□□ -0.13
Rai1Q61818 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.21□□□□□ -0.13
Rai1Q61818 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.21□□□□□ -0.13
Rai1Q61818 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.21□□□□□ -0.13
Rai1Q61818 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rai1Q61818 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.21□□□□□ -0.13
Rai1Q61818 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rai1Q61818 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Rai1Q61818 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.21□□□□□ -0.14
Rai1Q61818 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rai1Q61818 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rai1Q61818 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.21□□□□□ -0.14
Rai1Q61818 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.21□□□□□ -0.14
Rai1Q61818 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.21□□□□□ -0.14
Rai1Q61818 Gm28760-201ENSMUST00000185995 736 ntBASIC14.21□□□□□ -0.14
Rai1Q61818 Gm33320-201ENSMUST00000192232 530 ntBASIC14.21□□□□□ -0.14
Rai1Q61818 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.21□□□□□ -0.14
Rai1Q61818 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rai1Q61818 Gm9797-201ENSMUST00000052902 613 ntBASIC14.21□□□□□ -0.14
Rai1Q61818 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.21□□□□□ -0.14
Rai1Q61818 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Rai1Q61818 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.2□□□□□ -0.14
Rai1Q61818 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.2□□□□□ -0.14
Rai1Q61818 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.2□□□□□ -0.14
Rai1Q61818 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rai1Q61818 Gm44719-201ENSMUST00000206404 149 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms